Fasani RA, Savageau MA (2010) Automated construction and analysis of the design space for biochemical systems. Bioinformatics 26(20):2601–2609.
Lomnitz JG, Savageau MA (2013) Phenotypic deconstruction of gene circuitry. Chaos 23(2):025108.
Lomnitz JG, Savageau MA (2014) Strategy Revealing Phenotypic Differences among Synthetic Oscillator Designs. ACS Synth Biol 3(9):686–701.
Lomnitz JG, Savageau MA (2015) Elucidating the Genotype-Phenotype Map by Automatic Enumeration and Analysis of the Phenotypic Repertoire. npj Systems Biology and Applications 1 (1): xx xxx.
Millman KJ, Aivazis M (2011) Python for Scientists and Engineers. Computing in Science & Engineering 13(2):9–12.
Oliphant TE (2007) Python for Scientific Computing. Computing in Science & Engineering 9(3):10–20.
Pérez F, Granger BE (2007) IPython: A System for Interactive Scientific Computing. Computing in Science & Engineering 9(3):21–29.
Savageau MA (1976) Biochemical Systems Analysis: A Study of Function and Design in Molecular Biology (Addison-Wesley Publishing, Reading, MA).
Savageau MA, Voit EO (1987) Recasting nonlinear differential equations as S-systems: a canonical nonlinear form. Mathematical Biosciences 87(1):83–115.
Savageau MA, Coelho PMBM, Fasani RA, Tolla DA, Salvador A (2009) Phenotypes and tolerances in the design space of biochemical systems. Proc Natl Acad Sci USA 106(16):6435–6440.
Voit EO (2013) Biochemical Systems Theory: A Review. International Scholarly Research Notices 2013:e897658.